Inorganic Pyrophosphatase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-9   ASP-10  9.4 9.3 -4.6 0.5 69.5 72.7 28.9
 ASP-10   LEU-11  10.7 10.6 -2.3 -1.2 66.8 67.0 93.4
 LEU-11   PRO-12  9.4 9.2 2.2 1.0 124.9 121.4 -30.2
 PRO-12   GLU-13  9.1 9.0 3.2 4.6 135.7 138.1 -90.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-57   ILE-58  5.9 6.0 2.6 -2.5 83.5 84.0 -23.2
 ILE-58   ASN-59  3.5 3.6 2.4 0.6 14.4 13.8 67.2
 ASN-59   HIS-60  2.8 2.9 -0.8 -1.0 97.8 99.9 22.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-69   ASP-70  8.9 9.4 11.0 2.6 71.9 64.3 160.3
 ASP-70   VAL-71  9.2 9.6 -0.3 1.5 152.9 148.2 52.1
 VAL-71   LEU-72  7.0 7.2 -0.2 -3.3 108.8 111.1 -26.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-163   GLU-164  13.9 13.9 0.0 -4.5 37.8 42.1 -17.9
 GLU-164   ILE-165  12.7 12.8 3.7 1.0 47.7 44.6 32.5
 ILE-165   VAL-166  9.8 9.9 3.5 -1.0 56.8 51.4 66.8
 VAL-166   ALA-167  12.6 12.6 2.8 -2.5 50.9 51.4 0.7
 ALA-167   SER-168  14.9 14.8 1.4 -5.7 35.2 40.2 -96.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees