Cell Division Protein Kinase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-35   ARG-36  7.8 9.4 -12.3 -25.4 15.3 32.0 64.3
 ARG-36   LEU-37  8.9 9.4 -3.6 -55.7 55.6 71.1 29.6
 LEU-37   ASP-38  6.8 6.2 129.5 82.9 97.1 172.9 -201.3
 ASP-38   THR-39  5.8 6.7 155.1 -89.7 53.6 98.8 154.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-55   LYS-56  3.4 4.6 -1.0 -3.7 55.0 57.1 -0.7
 LYS-56   GLU-57  1.1 1.0 -12.4 7.3 13.9 41.7 6.2
 GLU-57   LEU-58  0.9 3.1 50.5 -60.2 129.2 125.0 12.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees