Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-32   PRO-33  6.0 6.9 6.2 8.7 32.3 22.3 39.6
 PRO-33   SER-34  4.3 5.2 -6.9 -4.9 107.7 105.2 55.7
 SER-34   GLN-35  6.9 7.8 -10.4 29.6 80.6 91.8 5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-91   LYS-92  7.5 6.5 18.4 -13.5 100.6 102.4 -13.4
 LYS-92   ARG-93  5.3 4.5 17.4 -6.4 71.4 64.6 -22.3
 ARG-93   ILE-94  2.5 1.7 3.7 3.4 121.1 122.0 6.4
 ILE-94   LEU-95  3.9 3.2 -6.5 7.6 24.6 34.6 -8.8
 LEU-95   GLN-96  2.8 1.4 -3.5 5.7 87.4 93.3 31.4
 GLN-96   ALA-97  1.0 2.1 -16.0 11.5 102.0 100.6 -10.0
 ALA-97   VAL-98  3.5 4.3 -11.2 16.4 50.5 45.8 -57.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  2.7 2.0 -7.4 3.8 45.8 48.9 15.8
 LYS-105   LEU-106  0.8 1.5 2.6 -4.2 113.6 114.2 -17.2
 LEU-106   GLU-107  3.3 3.4 -22.7 24.9 85.0 87.5 33.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-122   VAL-123  6.3 5.5 11.6 -25.3 129.1 134.9 32.3
 VAL-123   ALA-124  4.7 4.3 30.9 -10.7 136.8 125.7 37.0
 ALA-124   GLY-125  6.4 6.4 -9.6 38.2 54.2 74.3 -59.3
 GLY-125   GLY-126  6.8 6.8 -64.9 38.0 101.9 96.9 3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-315   PRO-316  6.3 6.0 5.1 -11.0 79.8 78.5 -5.2
 PRO-316   LYS-317  6.4 6.8 5.7 24.0 56.6 67.7 91.6
 LYS-317   PHE-318  5.8 6.5 3.9 67.4 125.4 130.6 -215.2
 ASP-329   TYR-330  20.3 25.4 -85.9 19.8 34.9 31.1 288.7
 TYR-330   GLU-331  21.9 24.1 -38.6 4.1 81.2 42.8 45.5
 GLU-331   GLU-332  25.0 25.6 75.2 -71.6 132.9 143.6 -2.2
 GLU-332   GLU-333  24.1 25.7 38.7 -47.4 141.0 146.6 8.6
 GLU-333   GLU-334  25.3 25.2 -5.1 -2.6 72.8 41.7 59.4
 GLU-334   ILE-335  25.7 26.0 56.6 -83.0 149.5 125.7 81.1
 ILE-335   ARG-336  23.0 23.9 -7.0 15.0 47.2 27.1 -33.3
 ARG-336   VAL-337  25.3 25.4 -44.8 17.4 35.0 42.8 100.4
 ILE-339   ASN-340  27.6 28.0 -40.4 2.7 23.8 33.5 162.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees