Myosin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-485   MET-486  5.6 4.7 -5.1 -1.2 47.0 53.0 -6.4
 MET-486   PHE-487  2.6 1.4 -10.6 -31.5 17.4 29.5 60.0
 PHE-487   LYS-488  3.5 2.3 -14.5 -7.2 66.6 59.5 36.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-504   ASP-505  7.2 6.9 56.5 -32.6 158.2 146.3 -16.2
 ASP-505   PHE-506  8.2 9.2 -17.0 25.3 47.5 46.5 7.3
 PHE-506   GLY-507  7.4 8.2 14.7 152.9 150.4 129.8 244.6
 GLY-507   LEU-508  8.8 11.3 11.5 -42.6 85.9 161.5 3.7
 LEU-508   ASP-509  12.2 9.4 148.1 -94.3 117.4 94.5 43.9
 ASP-509   SER-510  12.4 10.8 132.4 -1.9 172.7 148.8 -185.3
 SER-510   GLN-511  12.1 11.5 20.0 -1.3 101.0 90.6 -9.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-680   VAL-681  6.5 7.1 4.1 18.0 113.1 105.8 -5.7
 VAL-681   LEU-682  7.8 8.1 -9.8 1.6 40.6 24.2 23.9
 LEU-682   GLU-683  10.5 10.3 4.5 -5.7 142.9 136.6 -9.0
 GLU-683   GLY-684  8.7 7.7 31.8 -27.8 124.3 91.1 -4.2
 GLY-684   ILE-685  5.8 5.5 -1.6 3.5 53.0 61.1 4.5
 ILE-685   ARG-686  9.0 8.8 8.7 -4.6 151.7 166.5 -15.5
 ARG-686   ILE-687  10.4 8.5 -4.4 4.8 39.8 62.9 17.2
 ILE-687   THR-688  7.2 5.0 -5.8 -5.9 73.6 80.7 -1.5
 THR-688   ARG-689  8.2 7.2 -42.8 23.2 49.2 37.4 16.0
 ARG-689   LYS-690  10.6 9.5 1.4 2.5 146.9 154.6 14.3
 LYS-690   GLY-691  8.1 7.3 38.4 -42.4 83.3 111.0 -1.1
 GLY-691   PHE-692  5.6 5.2 135.4 -36.2 81.6 94.7 7.3
 PHE-692   PRO-693  8.6 7.5 11.2 43.0 108.0 43.6 40.0
 PRO-693   ASN-694  9.0 8.9 3.5 -27.9 75.7 100.5 32.5
 ASN-694   ARG-695  11.7 12.0 103.6 -30.1 111.5 143.1 -118.7
 ARG-695   ILE-696  13.3 12.7 83.2 -1.9 126.7 86.5 -52.4
 ILE-696   ILE-697  15.0 16.1 36.3 38.9 68.8 142.8 -102.6
 ILE-697   TYR-698  18.7 17.5 66.3 3.3 125.5 125.1 234.2
 TYR-698   ALA-699  19.9 18.8 -23.1 59.5 78.8 96.6 38.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees