Udp-Glucose 6-Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-91   PRO-92  7.5 6.6 9.2 14.9 81.3 90.3 26.7
 PRO-92   THR-93  9.6 8.9 -12.3 -4.3 76.8 86.4 61.3
 THR-93   LYS-94  9.6 8.9 0.1 6.1 169.5 159.8 -28.0
 LYS-94   THR-95  9.5 8.9 2.7 5.8 97.7 95.3 -114.8
 THR-95   TYR-96  13.0 12.4 -37.5 13.8 30.0 57.6 181.0
 TYR-96   GLY-97  12.2 12.4 1.6 10.4 91.6 86.9 -16.0
 GLY-97   MET-98  10.9 11.7 3.5 -5.6 43.1 33.2 -18.5
 MET-98   GLY-99  10.3 10.8 -19.7 18.2 156.6 147.4 -0.7
 GLY-99   LYS-100  10.7 10.5 -2.2 1.7 97.2 91.6 -10.3
 LYS-100   GLY-101  12.5 12.1 2.7 -3.9 25.4 23.7 -11.6
 GLY-101   ARG-102  13.6 12.8 -6.2 5.0 139.6 143.4 -17.7
 ARG-102   ALA-103  11.0 10.2 18.7 -14.5 93.6 98.0 15.7
 ALA-103   ALA-104  7.5 6.9 -19.2 10.4 90.3 79.5 -4.3
 ALA-104   ASP-105  5.1 4.6 -1.5 -2.7 16.8 20.4 43.6
 ASP-105   LEU-106  5.5 4.3 4.8 14.3 87.2 88.5 9.0
 LEU-106   LYS-107  3.4 2.7 -2.7 9.6 37.1 40.6 -54.2
 LYS-107   TYR-108  5.4 4.8 -9.4 4.8 100.6 100.8 -0.6
 TYR-108   ILE-109  8.6 8.1 -6.1 4.3 111.3 111.2 -4.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-221   ALA-222  1.8 1.9 1.8 -6.9 33.2 33.1 -11.7
 ALA-222   ALA-223  2.8 3.1 1.0 0.3 48.4 42.2 8.5
 ALA-223   ASN-224  2.4 2.1 -1.1 1.8 77.9 80.4 30.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees