Transcriptional Regulator (Ntrc Family)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-153   LYS-154  3.4 3.5 -29.5 18.0 39.6 26.8 95.5
 LYS-154   LYS-155  6.0 6.0 -14.5 13.6 30.7 30.3 -27.7
 LYS-155   ILE-156  4.0 4.4 7.1 6.7 95.2 96.8 7.4
 ILE-156   SER-157  0.8 1.4 -20.3 -8.7 93.7 80.0 -17.4
 SER-157   CYS-158  4.6 5.0 71.3 -46.7 137.2 160.7 -209.4
 CYS-158   ALA-159  5.6 4.9 6.3 -56.9 112.2 107.3 266.8
 ALA-159   GLU-160  4.5 4.6 -5.9 -3.9 106.1 126.7 29.0
 GLU-160   CYS-161  8.2 7.9 41.2 -9.4 56.6 72.9 156.4
 CYS-161   PRO-162  8.5 7.8 -4.4 2.1 168.6 175.5 -43.6
 PRO-162   VAL-163  8.9 9.0 -27.0 20.1 114.6 119.9 5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-164   ILE-165  7.6 8.0 -50.2 59.0 56.2 44.7 -88.0
 ILE-165   THR-166  5.1 5.2 -9.0 19.7 31.6 40.7 -59.9
 THR-166   GLY-167  6.6 7.1 5.3 -12.4 131.1 143.0 64.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-171   GLY-172  1.1 1.5 38.5 -26.9 136.5 139.6 -53.4
 GLY-172   LYS-173  2.2 2.4 -27.8 32.9 35.0 44.7 -27.0
 LYS-173   GLU-174  2.6 2.3 14.9 -9.6 114.1 114.1 -27.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-297   TYR-298  16.5 16.2 -0.3 -3.3 139.6 149.0 -15.2
 TYR-298   ARG-299  16.2 16.0 21.0 -23.8 61.6 59.5 -17.6
 ARG-299   LEU-300  14.3 14.8 51.3 -58.3 120.9 115.4 114.9
 LEU-300   GLY-301  12.0 11.9 22.0 4.6 93.1 91.1 8.5
 GLY-301   VAL-302  11.5 11.2 -18.7 17.1 145.6 136.9 -15.9
 VAL-302   ILE-303  10.3 9.3 44.7 -57.3 103.0 104.5 84.3
 ILE-303   GLU-304  6.8 6.3 -81.3 88.8 1.9 8.0 -104.8
 GLU-304   ILE-305  6.9 7.6 21.4 -37.0 113.4 108.5 124.6
 ILE-305   GLU-306  4.6 5.4 -28.5 48.5 160.7 171.1 266.7
 ILE-305   GLU-306  4.6 5.4 -28.5 48.5 160.7 171.1 266.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-305   GLU-306  4.6 5.4 -28.5 48.5 160.7 171.1 266.7
 ILE-305   GLU-306  4.6 5.4 -28.5 48.5 160.7 171.1 266.7
 GLU-306   ILE-307  6.4 7.0 43.6 -45.7 57.7 63.7 -183.5
 ILE-307   PRO-308  4.8 5.2 -10.4 16.4 143.5 150.6 143.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-309   LEU-310  7.2 7.1 14.0 -8.6 96.7 93.6 23.3
 LEU-310   ARG-311  7.8 7.7 1.9 -7.8 105.3 107.3 30.9
 ARG-311   GLU-312  10.8 10.7 27.1 -33.3 39.8 41.2 -99.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees