Tryptophan Synthase Beta Chain 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-89   ALA-90  4.2 4.2 -0.5 -0.2 152.0 153.5 45.3
 ALA-90   LEU-91  3.9 3.9 -1.3 -0.5 108.4 109.7 -81.1
 LEU-91   LEU-92  7.3 7.3 1.8 -3.7 119.3 120.4 78.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-100   LEU-101  8.9 8.9 -3.0 0.0 152.5 150.3 -73.7
 LEU-101   ILE-102  6.7 6.6 -2.5 0.4 100.3 102.5 18.7
 ILE-102   ALA-103  8.4 8.4 -1.4 -0.7 136.1 136.4 10.1
 ALA-103   GLU-104  7.8 7.7 -9.8 11.3 104.1 103.7 -7.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-180   TYR-181  8.7 8.6 -10.1 13.8 107.2 107.9 -69.2
 TYR-181   LEU-182  7.7 7.8 -6.2 5.4 108.1 105.4 29.5
 LEU-182   ILE-183  4.1 4.1 -5.5 7.1 128.4 128.9 -9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-279   TYR-280  6.8 7.0 -3.6 8.6 71.5 71.8 -38.6
 TYR-280   PHE-281  9.5 9.8 -1.8 -1.4 142.9 139.4 -7.1
 PHE-281   LEU-282  12.7 13.0 -13.3 20.4 69.8 64.6 47.9
 LEU-282   GLN-283  16.3 16.6 25.6 15.0 86.2 95.8 -71.8
 GLN-283   ASP-284  18.2 18.8 10.0 -13.8 136.9 106.3 28.1
 GLY-287   GLN-288  20.2 20.3 -32.7 14.1 171.0 166.5 -292.6
 GLN-288   ILE-289  20.9 20.8 1.0 8.6 77.5 65.7 -16.6
 ILE-289   LYS-290  18.6 18.6 6.0 -37.0 76.2 69.1 -204.6
 LYS-290   PRO-291  20.5 20.8 -0.2 6.0 152.0 138.3 255.0
 PRO-291   THR-292  21.5 21.3 -7.1 7.8 71.0 73.2 11.3
 THR-292   HIS-293  20.1 19.9 18.5 -14.5 58.9 52.3 10.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-294   ILE-295  22.0 21.5 -1.3 -3.9 154.2 153.0 -54.8
 ILE-295   ALA-296  23.8 23.5 4.5 -11.8 54.7 52.9 -45.6
 ALA-296   PRO-297  20.4 20.2 -1.9 -3.8 101.7 96.4 64.9
 PRO-297   GLY-298  18.7 18.3 5.6 11.7 109.7 106.4 -77.6
 GLY-298   LEU-299  15.1 14.9 -13.0 1.6 11.2 9.6 162.3
 LEU-299   ASP-300  15.6 15.6 -41.9 10.9 76.0 70.3 213.7
 ASP-300   TYR-301  16.1 17.0 90.0 -86.9 115.3 97.0 -141.6
 TYR-301   PRO-302  13.2 14.6 -0.4 10.2 15.8 3.9 -176.5
 PRO-302   GLY-303  14.5 15.1 -38.5 43.7 45.4 59.9 49.1
 GLY-303   VAL-304  11.2 11.4 -11.8 -7.5 96.2 96.5 -22.5
 VAL-304   GLY-305  8.2 8.4 -3.2 -3.8 85.2 83.5 66.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees