Cytochrome B6-F Complex Iron-Sulfur Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-45   SER-46  23.4 23.3 -15.1 12.2 110.2 119.0 -51.1
 SER-46   GLY-47  20.8 21.1 -34.5 -34.9 80.8 79.9 138.2
 GLY-47   GLY-48  18.8 19.4 55.3 58.6 65.7 41.6 358.3
 GLY-48   ALA-49  20.3 18.2 -99.9 68.4 148.5 112.1 -182.8
 ALA-49   VAL-50  22.7 22.1 -102.7 -21.8 135.0 141.0 -481.7
 THR-54   THR-55  17.7 17.4 10.5 -1.5 111.1 136.1 -173.9
 THR-55   ALA-56  18.3 18.2 -42.0 48.1 50.3 44.4 -15.0
 ALA-56   LYS-57  15.8 15.7 1.2 -16.1 161.9 161.9 81.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees