Human Immunodeficiency Virus Type 1 Reverse Transcriptase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-216
PRO-217
20.5
20.1
62.1
-2.2
25.5
37.8
127.8
PRO-217
ASP-218
19.5
17.7
-38.0
4.3
97.0
83.5
-1.8
ASP-218
LYS-219
17.8
18.7
173.2
28.7
92.3
96.2
-4.6
LYS-219
LYS-220
14.6
17.0
-70.6
8.8
20.4
136.1
-185.2
LYS-220
HIS-221
13.7
15.3
-161.2
-31.1
98.9
89.3
-137.5
HIS-221
GLN-222
10.1
14.0
-64.3
-26.7
77.0
38.0
196.2
GLN-222
LYS-223
11.8
12.2
-8.0
-27.8
79.1
101.1
15.7
LYS-223
GLU-224
10.1
8.6
61.5
53.6
40.5
119.4
135.1
GLU-224
PRO-225
7.5
6.0
53.5
-53.8
118.2
124.1
16.8
PRO-225
PRO-226
4.9
3.3
-139.3
-12.9
90.3
131.6
-65.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-311
GLU-312
19.7
20.3
5.4
-48.1
64.6
85.5
-20.3
GLU-312
PRO-313
18.4
18.0
23.4
11.0
85.7
55.5
17.5
PRO-313
VAL-314
14.7
14.4
16.6
-34.7
23.5
17.6
-47.2
VAL-314
HIS-315
12.8
13.9
-12.8
45.4
88.2
108.7
6.3
HIS-315
GLY-316
9.9
10.6
-19.6
87.8
152.2
178.7
153.9
GLY-316
VAL-317
8.7
9.5
-33.3
21.8
93.4
101.2
-23.3
VAL-317
TYR-318
6.7
7.5
9.8
-13.4
51.0
59.2
3.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees