Small-Conductance Mechanosensitive Channel

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-84   ALA-85  2.9 2.8 -0.8 3.8 11.1 11.3 -35.7
 ALA-85   LEU-86  4.0 4.0 -0.7 -2.4 53.6 54.3 27.4
 LEU-86   GLY-87  1.7 1.6 0.1 5.1 89.6 86.3 20.7
 GLY-87   ARG-88  1.9 1.8 -2.2 -1.1 51.9 50.8 36.8
 ARG-88   VAL-89  4.1 4.1 -5.8 0.0 15.2 21.5 80.0
 VAL-89   GLY-90  2.1 1.8 32.9 -31.3 106.1 102.3 -74.8

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees