6-Phosphogluconate Dehydrogenase, Decarboxylating

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-25   GLY-26  10.6 10.4 1.0 -1.2 78.9 78.0 188.1
 GLY-26   TYR-27  14.2 14.2 7.0 -5.6 135.8 137.4 -34.8
 TYR-27   THR-28  15.8 15.8 2.6 -0.8 87.3 87.8 37.1
 THR-28   VAL-29  18.9 18.8 -1.7 3.4 22.2 21.2 -91.1
 VAL-29   SER-30  18.5 18.4 -3.0 4.8 71.5 69.7 -58.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-103   PHE-104  9.4 9.3 0.2 -0.8 127.9 127.2 59.7
 PHE-104   PHE-105  8.8 8.6 2.3 -4.9 108.9 107.3 80.4
 PHE-105   GLN-106  5.1 4.9 0.5 -1.9 150.6 150.6 42.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-109   ARG-110  4.4 4.4 -1.2 3.2 121.6 122.2 -46.6
 ARG-110   ARG-111  7.6 7.6 -2.1 0.6 56.1 56.3 124.0
 ARG-111   ASN-112  9.9 9.9 -0.8 0.7 75.7 75.4 -46.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-126   VAL-127  4.1 4.1 -0.5 0.6 169.2 171.1 23.5
 VAL-127   SER-128  5.3 5.3 -3.4 3.8 104.8 105.2 -56.4
 SER-128   GLY-129  6.9 7.0 1.1 4.3 6.1 4.2 266.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-133   ALA-134  7.8 7.8 3.3 -1.6 69.4 68.4 106.3
 ALA-134   LEU-135  8.6 8.7 2.1 -0.3 140.6 142.3 27.1
 LEU-135   LYS-136  9.4 9.4 3.0 -4.4 119.1 118.9 90.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-142   GLY-143  3.0 3.1 1.5 -1.2 146.0 144.0 18.2
 GLY-143   GLY-144  3.9 4.0 -2.8 0.6 66.5 65.5 64.8
 GLY-144   GLN-145  6.9 7.0 1.4 -1.8 95.9 95.7 -95.3
 GLN-145   LYS-146  10.4 10.4 0.6 0.7 23.9 23.5 107.0
 LYS-146   GLU-147  11.8 11.9 1.4 -0.2 62.0 62.7 -50.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-149   GLU-150  10.3 10.3 -0.4 1.4 40.4 41.7 -54.4
 GLU-150   LEU-151  13.3 13.4 1.2 -1.9 116.6 115.6 40.9
 LEU-151   VAL-152  14.6 14.6 2.9 -2.2 131.3 131.1 -5.1
 VAL-152   ALA-153  11.6 11.6 -1.9 -0.5 54.6 53.6 108.3
 ALA-153   PRO-154  10.1 10.1 3.3 -0.5 169.1 169.8 -154.0
 PRO-154   ILE-155  11.6 11.6 1.1 -5.5 111.8 111.3 51.4
 ILE-155   LEU-156  10.4 10.4 2.1 0.3 83.3 82.0 -1.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-172   ILE-173  7.2 7.3 -3.0 1.4 122.7 123.9 17.1
 ILE-173   GLY-174  5.6 5.7 1.9 -1.4 25.2 24.9 115.2
 GLY-174   ALA-175  6.5 6.6 0.5 -1.9 61.1 61.6 -8.1
 ALA-175   ASP-176  6.1 6.3 -0.7 0.9 102.5 101.5 -98.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees