Mlc Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-212   ARG-213  11.6 10.9 13.3 -9.6 40.6 28.4 90.0
 ARG-213   ASP-214  10.6 9.9 -35.9 15.5 95.7 90.5 -22.0
 ASP-214   VAL-215  8.1 8.0 -16.3 19.9 29.2 22.0 13.8
 VAL-215   ILE-216  6.0 6.0 12.1 -17.7 87.0 85.5 18.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-224   GLY-225  10.0 10.5 5.5 -41.0 152.5 160.4 157.8
 GLY-225   ALA-226  7.7 8.2 12.5 5.9 98.8 94.2 -60.6
 ALA-226   GLY-227  4.5 4.9 4.4 1.1 130.3 126.9 -9.2
 GLY-227   VAL-228  2.0 2.3 4.2 8.9 109.9 114.1 -26.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-234   LEU-235  4.9 4.6 -20.6 16.3 43.0 47.4 27.5
 LEU-235   HIS-236  2.3 2.4 -5.9 -2.0 88.2 93.8 -0.8
 HIS-236   ALA-237  5.5 5.8 -15.9 10.9 96.4 105.9 14.5
 ALA-237   GLY-238  7.6 7.8 160.7 147.1 132.5 126.8 178.8
 GLY-238   SER-239  8.9 11.3 16.9 39.6 91.9 137.8 -107.3
 SER-239   SER-240  10.5 10.8 -10.9 5.2 159.6 123.3 -26.1
 SER-240   SER-241  12.4 13.2 14.9 -55.1 62.1 73.2 -42.4
 SER-241   LEU-242  10.6 11.2 -12.9 1.2 137.9 130.9 -33.9
 LEU-242   VAL-243  8.8 9.0 16.5 -3.9 96.2 89.1 -9.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-376   GLN-377  3.8 3.6 6.5 6.1 45.5 50.7 48.6
 GLN-377   PHE-378  6.6 6.4 -3.5 1.4 119.3 121.3 -46.0
 PHE-378   SER-379  6.2 5.7 3.6 -7.2 84.7 74.8 9.8
 SER-379   ASN-380  4.6 4.2 -1.5 12.4 55.5 64.6 19.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees