Nad(p) Transhydrogenase Subunit Alpha Part 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-133   MET-134  2.1 2.6 11.0 13.5 75.6 84.8 72.4
 MET-134   ASP-135  2.8 2.8 -21.6 6.8 123.2 130.4 -20.8
 ASP-135   ILE-136  5.2 5.4 5.1 -6.7 20.0 15.3 9.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-329   ASP-330  6.5 6.3 18.7 -11.8 44.6 51.5 70.7
 ASP-330   ALA-331  4.2 3.9 -7.4 9.6 130.8 136.2 28.5
 ALA-331   SER-332  2.7 2.6 1.6 -7.5 47.2 45.8 -51.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-334   PHE-335  2.9 2.8 2.7 2.7 119.6 120.3 -48.1
 PHE-335   ALA-336  4.6 4.5 -4.6 -0.4 43.9 43.0 46.9
 ALA-336   LYS-337  7.0 7.0 13.1 -20.6 144.1 142.4 84.2
 LYS-337   ASN-338  4.9 4.8 8.8 4.8 55.6 58.6 157.5
 LYS-337   ASN-338  4.9 4.8 8.8 4.8 55.6 58.6 157.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-337   ASN-338  4.9 4.8 8.8 4.8 55.6 58.6 157.5
 LYS-337   ASN-338  4.9 4.8 8.8 4.8 55.6 58.6 157.5
 ASN-338   LEU-339  3.1 2.9 -0.2 0.6 128.3 131.8 9.6
 LEU-339   LEU-340  6.7 6.4 -9.2 4.8 136.2 137.1 -57.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees