Catabolite Gene Activator Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-349   LEU-350  9.3 9.3 -1.2 -10.7 81.2 81.2 234.1
 LEU-350   ILE-351  5.9 5.9 5.1 -9.2 51.7 44.1 -104.9
 ILE-351   LYS-352  2.3 2.4 5.7 -11.0 87.7 90.0 172.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-357   GLU-358  7.7 7.6 5.8 -3.5 82.8 75.8 265.3
 GLU-358   MET-359  5.8 5.8 -9.7 12.4 159.5 155.3 39.0
 MET-359   ILE-360  3.9 3.6 -5.0 2.2 87.2 91.4 -102.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ALA-421   ARG-422  18.7 18.9 0.8 -3.1 125.7 125.5 322.1
 ARG-422   ARG-423  16.8 17.1 0.5 -0.4 69.3 73.7 91.7
 ARG-423   LEU-424  14.0 14.1 5.9 -10.5 98.0 102.1 60.3
 LEU-424   GLN-425  13.9 13.8 7.2 -4.0 158.7 167.8 -174.5
 GLN-425   VAL-426  13.6 14.1 -5.0 -0.4 83.6 78.0 40.2
 VAL-426   THR-427  10.7 11.4 11.8 -3.6 62.7 70.2 480.3
 THR-427   SER-428  8.8 8.9 17.7 1.2 117.4 123.6 -1143.3
 SER-428   GLU-429  10.1 9.7 -14.5 -3.3 40.5 50.9 197.1
 GLU-429   LYS-430  7.9 7.0 -2.4 9.5 107.5 123.0 644.4
 LYS-430   VAL-431  4.8 4.4 -0.8 -17.7 98.0 120.2 -517.3
 VAL-431   GLY-432  6.6 5.8 17.1 -3.5 147.7 133.5 -442.4
 GLY-432   ASN-433  7.0 6.7 -1.2 9.5 79.1 82.2 497.8
 ASN-433   LEU-434  3.5 3.6 -2.8 10.3 127.0 133.2 222.0
 LEU-434   ALA-435  4.4 4.5 -1.5 -11.3 80.0 81.6 255.4
 ALA-435   PHE-436  8.0 8.1 1.5 7.0 148.5 153.0 -666.1
 PHE-436   LEU-437  7.7 7.6 0.1 -9.8 99.6 95.1 571.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees