DNA Polymerase IV

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  PRO-1236   ILE-1237  12.7 11.9 -11.7 -16.4 78.3 84.4 -0.5  PRO-1236   ILE-1237  12.7 11.9 -11.7 -16.4 78.3 84.4 -0.5  ILE-1237   ARG-1238  9.0 8.6 -19.8 -19.8 68.6 79.8 23.7  ARG-1238   THR-1239  7.1 5.8 5.6 -17.2 107.3 142.2 4.3  THR-1239   ARG-1240  3.7 3.0 2.4 -50.1 161.9 144.4 37.0  ARG-1240   VAL-1241  2.8 3.7 -32.2 173.5 56.6 42.8 -80.5  VAL-1241   ARG-1242  1.6 2.0 -62.1 -58.9 36.6 24.7 85.6  ARG-1242   LYS-1243  1.2 2.3 -7.5 -8.5 31.0 46.9 16.5  LYS-1243   SER-1244  0.7 1.0 9.3 5.0 135.9 140.5 -6.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees