Glucose Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-190   ILE-191  0.8 0.4 0.5 2.0 130.0 131.7 11.6
 ILE-191   ASN-192  2.6 2.4 5.6 -3.0 88.4 86.6 50.3
 ASN-192   THR-193  6.1 6.1 1.6 -11.3 142.6 141.6 79.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-210   SER-211  5.3 5.0 -4.2 3.1 49.7 49.2 36.9
 SER-211   MET-212  5.1 4.9 0.8 -3.9 73.9 77.2 -42.0
 MET-212   ILE-213  4.5 4.2 -1.0 11.9 144.5 147.3 84.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees