Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-455   GLY-456  8.7 8.6 -1.5 -1.9 143.5 143.5 -38.5
 GLY-456   THR-457  7.7 7.6 0.8 1.3 19.1 20.6 59.9
 THR-457   TYR-458  7.9 7.9 0.8 -1.6 81.3 83.1 21.5
 TYR-458   GLY-459  7.6 7.7 -1.8 1.9 86.5 87.3 110.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  7.9 7.8 -2.0 1.0 156.5 154.5 -64.5
 ASP-477   VAL-478  7.9 7.8 -0.4 0.7 102.1 101.4 61.8
 VAL-478   PRO-479  5.5 5.3 -1.2 6.2 143.1 142.2 98.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees