Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-223   ASN-224  6.7 6.7 -32.4 26.5 96.2 90.1 -15.3
 ASN-224   VAL-225  4.9 4.8 4.5 -26.7 157.2 158.0 60.8
 VAL-225   PHE-226  2.5 2.3 0.4 -11.9 98.8 91.0 -2.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-229   TYR-230  9.0 9.1 -1.0 23.7 164.2 157.0 59.0
 TYR-230   ASP-231  8.2 8.1 -2.7 -1.9 120.2 121.4 -23.9
 ASP-231   THR-232  9.7 10.1 -3.1 0.5 113.8 119.1 -11.4
 THR-232   GLU-233  7.5 8.3 -12.1 6.5 117.0 113.3 16.4
 THR-232   GLU-233  7.5 8.3 -12.1 6.5 117.0 113.3 16.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-232   GLU-233  7.5 8.3 -12.1 6.5 117.0 113.3 16.4
 THR-232   GLU-233  7.5 8.3 -12.1 6.5 117.0 113.3 16.4
 GLU-233   ASP-234  9.4 10.5 3.5 -2.3 3.5 12.3 -6.7
 ASP-234   GLY-235  8.0 9.4 1.6 6.1 64.6 57.4 3.6
 GLY-235   THR-236  7.0 7.9 -5.2 -2.0 93.3 95.2 -11.7
 THR-236   GLY-237  3.2 4.1 -6.4 -14.9 23.7 23.4 71.4
 GLY-237   VAL-238  1.8 2.2 10.7 3.6 121.8 123.8 -48.4
 VAL-238   ARG-239  0.7 1.4 1.8 2.2 127.4 118.4 -3.4
 ARG-239   ASP-240  3.0 2.6 23.7 -19.0 121.7 125.9 -52.1
 ASP-240   TYR-241  5.3 5.2 30.5 -47.2 74.6 77.1 0.0
 TYR-241   ILE-242  8.7 8.8 0.0 4.8 136.2 136.3 -6.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-292   PRO-293  10.8 10.1 41.3 -12.8 71.3 47.5 54.5
 PRO-293   TYR-294  7.8 7.9 -68.4 70.9 63.2 71.1 -17.4
 TYR-294   LYS-295  4.4 4.5 -31.6 31.7 118.4 131.3 -11.3
 LYS-295   VAL-296  0.8 1.6 -31.9 4.5 43.7 47.6 68.3
 VAL-296   VAL-297  2.2 1.6 4.4 -4.2 71.2 73.9 2.3
 VAL-297   ALA-298  5.4 4.8 -18.4 2.0 43.4 46.5 45.8
 ALA-298   ARG-299  8.6 8.0 -19.9 -1.3 25.2 23.6 71.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-308   ALA-309  1.8 2.1 -0.4 -6.9 170.7 168.2 -40.5
 ALA-309   ASN-310  3.3 3.6 -8.2 19.6 132.0 133.4 60.2
 ASN-310   PRO-311  2.5 2.6 10.2 -7.3 66.3 63.4 11.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees