Ccaat/enhancer Binding Protein Beta

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ccaat/enhancer Binding Protein Beta
  Conformer 1
(PDB)
1hjb (E)
  Conformer 2
(PDB)
1hjb (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 34 0.86   270 - 303
2 30 0.75   304 - 333

Sequence


           _________________________________303________________________________                                                     
 1hjb(E) : DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLP                                                     
         :                                                                                                                          
 1hjb(D) : DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLP                                                     
           _________________________________303________________________________                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
27.7
Translation
(A)
-1.1
Closure
(%)
99.8
Bending Residues
( green )
  303 - 305
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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