Chemotaxis Protein Chea

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chemotaxis Protein Chea
  Conformer 1
(PDB)
2ch4 (B)
  Conformer 2
(PDB)
1b3q (B)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 165 1.68   358 - 391   396 - 536   639 - 642
2 122 1.64   392 - 395   537 - 638   643 - 666

Sequence


           ________________________________________________________________________________________________391_395_________________ 
 2ch4(B) : ************************************************************SHMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAID 
         :                                                                                                                          
 1b3q(B) : SQTVRVDIEKLDNLMDLMGELVIARSRILETLKKYNIKELDESLSHLSRITLDLQNVVMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAID 
           ________________________________________________________________________________________________391_395_________________ 

           ________________________________________________________________________________________________________________________ 
 2ch4(B) : HGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFS--------------mDVVKNVVESLNGSISIESEKDKGTK 
         :                                                                                                                          
 1b3q(B) : HGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSMGIESEKDKGTK 
           ________________________________________________________________________________________________________________________ 

           _536_________________________________________________________________________________________________636___642__________ 
 2ch4(B) : VTIRLPLTLAIIQALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRDVIVIRGEVIPVYRLWEVLQIEHKEELEEMEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEVKEFSG 
         :                                                                                                                          
 1b3q(B) : VTIRLPLTLAIICALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRDVIVIRGEVIPVYRLWEVLQI--------mEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEVKEFSG 
           _536_________________________________________________________________________________________________636___642__________ 

           ___________________                                                                                                      
 2ch4(B) : AAILGDGSIALIINVSGIV                                                                                                      
         :                                                                                                                          
 1b3q(B) : AAILGDGSIALIINVSGI*                                                                                                      
           ___________________                                                                                                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.2
Translation
(A)
0.1
Closure
(%)
98.4
Bending Residues
( green )
  391 - 392
  395 - 396
  536 - 543
  636 - 639
  642 - 647
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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