Death-Associated Protein Kinase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Death-Associated Protein Kinase 2
  Conformer 1
(PDB) 		1z9x (C)
  Conformer 2
(PDB) 		2a27 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 236 0.82   11 - 27   29 - 38   42 - 42   95 - 302
2 63 0.68   4 - 10   28 - 28   39 - 41   43 - 94

Sequence


           _______10_______________27_________38_41___________________________________________________94___________________________ 
 1z9x(C) : EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 
         :                                                                                                                          
 2a27(B) : EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 
           _______10_______________27_________38_41___________________________________________________94___________________________ 

           ________________________________________________________________________________________________________________________ 
 1z9x(C) : QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 
         :                                                                                                                          
 2a27(B) : QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________                                                          
 1z9x(C) : SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRR                                                          
         :                                                                                                                          
 2a27(B) : SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRR                                                          
           _______________________________________________________________                                                          

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.6
Translation
(A) 		0.7
Closure
(%) 		83.1
Bending Residues
( green ) 		  10 - 11
  27 - 29
  38 - 39
  41 - 43
  94 - 96
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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