Follicle Stimulating Protein Alpha Chain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Follicle Stimulating Protein Alpha Chain
  Conformer 1
(PDB)
1fl7 (C)
  Conformer 2
(PDB)
1qfw (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 42 1.09   8 - 28   61 - 81
2 37 0.61   29 - 60   82 - 86

Sequence


           ______________________28______________________________60___________________81___________                                 
 1fl7(C) : QDCPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCCVAKSYNRVTVMGGFKVENHTACHCSTCYYHKS                                 
         :                                                                                                                          
 1qfw(A) : *DCPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCCVAKSYNRVTVMGGFKVENHTACHCSTCYYHKS                                 
           ______________________28______________________________60___________________81___________                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.5
Translation
(A)
0.8
Closure
(%)
86.3
Bending Residues
( green )
  28 - 29
  60 - 61
  81 - 82
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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