Heme Oxygenase-1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heme Oxygenase-1
  Conformer 1
(PDB)
1ix3 (A)
  Conformer 2
(PDB)
1irm (C)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 162 1.03   46 - 142   147 - 148   155 - 217
2 21 2.13   35 - 45   143 - 146   149 - 154

Sequence


           _________________________________45_____________________________________________________________________________________ 
 1ix3(A) : QDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLV 
         :                                                                                                                          
 1irm(C) : *******************NSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLV 
           _________________________________45_____________________________________________________________________________________ 

           ______139____146_____154______________________________________________________________________________                   
 1ix3(A) : AHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTeFLRQRPASL                   
         :                                                                                                                          
 1irm(C) : AHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTEEH*******                   
           ______139____146_____154______________________________________________________________________________                   

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.8
Translation
(A)
-0.1
Closure
(%)
49.1
Bending Residues
( green )
  45 - 46
  139 - 143
  146 - 149
  154 - 163
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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