Mandelate Racemase/muconate Lactonizing Enzyme/enolase Superfamily

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Mandelate Racemase/muconate Lactonizing Enzyme/enolase Superfamily
  Conformer 1
(PDB)
2hzg (A)
  Conformer 2
(PDB)
2hzg (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 264 0.43   4 - 137   253 - 264   267 - 267   274 - 390
2 123 0.37   138 - 252   265 - 266   268 - 273

Sequence


           ________________________________________________________________________________________________________________________ 
 2hzg(A) : SLKIDAVDLFYLSMPEVTDAADGSQDALLVRVAAGGHIGWGECEAAPLPSIAAFVCPKSHGVCRPVSDSVLGQRLDGPDDIARIAALVGYNSMDLLQAPHMLSGIEMALWDLLGRRLSAP 
         :                                                                                                                          
 2hzg(B) : SLKIDAVDLFYLSMPEVTDAADGSQDALLVRVAAGGHIGWGECEAAPLPSIAAFVCPKSHGVCRPVSDSVLGQRLDGPDDIARIAALVGYNSMDLLQAPHMLSGIEMALWDLLGRRLSAP 
           ________________________________________________________________________________________________________________________ 

           ____________136_________________________________________________________________________________________________________ 
 2hzg(A) : AWALLGYSASHGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEEPFDAGALAAHAAL 
         :                                                                                                                          
 2hzg(B) : AWALLGYSASHGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEEPFDAGALAAHAAL 
           ____________136_________________________________________________________________________________________________________ 

           _______251_______261____________________________________________________________________________________________________ 
 2hzg(A) : AGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNHTFTSHLALSASLQPFAGLEADRICEYPAAPQQLALDITGDHIRPDAEGLIRAPEAPG 
         :                                                                                                                          
 2hzg(B) : AGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNHTFTSHLALSASLQPFAGLEADRICEYPAAPQQLALDITGDHIRPDAEGLIRAPEAPG 
           _______251_______261____________________________________________________________________________________________________ 

           _________________________________                                                                                        
 2hzg(A) : LGLQVAASALRRYLVETEIRIGGQLIYRTPQLE                                                                                        
         :                                                                                                                          
 2hzg(B) : LGLQVAASALRRYLVETEIRIGGQLIYRTPQ**                                                                                        
           _________________________________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.1
Translation
(A)
0.6
Closure
(%)
96.9
Bending Residues
( green )
  136 - 142
  251 - 254
  261 - 276
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download