C-Jun Proto-Oncogene (Transcription Factor Ap-1)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name C-Jun Proto-Oncogene (Transcription Factor Ap-1)
  Conformer 1
(PDB)
1fos (E)
  Conformer 2
(PDB)
1a02 (F)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 27 0.51   164 - 190
2 22 0.64   142 - 163

Sequence


           ______________________163___________________________________                                                             
 1fos(E) : KRRIRRERNKMAAAKSRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILA                                                             
         :                                                                                                                          
 1a02(F) : *RRIRRERNKMAAAKSRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEK******                                                             
           ______________________163___________________________________                                                             

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
24.9
Translation
(A)
0.5
Closure
(%)
52.5
Bending Residues
( green )
  163 - 166
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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