DNA Helicase Uvsw

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name DNA Helicase Uvsw
  Conformer 1
(PDB)
1rif (B)
  Conformer 2
(PDB)
1rif (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 253 0.67   3 - 30   53 - 264   268 - 280
2 25 0.63   31 - 52   265 - 267

Sequence


           ____________________________30____________________52____________________________________________________________________ 
 1rif(B) : MDIKVHFHDFSHVRIDCEESTFHELRDFFSFEADGYRFNPRFRYGNWDGRIRLLDYNRLLPFGLVGQIKKFCDNFGYKAWIDPQINEKEELSRKDFDEWLSKLEIYSGNKRIEPHWYQKD 
         :                                                                                                                          
 1rif(A) : MDIKVHFHDFSHVRIDCEESTFHELRDFFSFEADGYRFNPRFRYGNWDGRIRLLDYNRLLPFGLVGQIKKFCDNFGYKAWIDPQINEKEELSRKDFDEWLSKLEIYSGNKRIEPHWYQKD 
           ____________________________30____________________52____________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1rif(B) : AVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGK 
         :                                                                                                                          
 1rif(A) : AVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGK 
           ________________________________________________________________________________________________________________________ 

           _____________________264__________________                                                                               
 1rif(B) : SISSIISGLNNCMFKFGLSGSLRDGKANIMQYVGMFGEIFKP                                                                               
         :                                                                                                                          
 1rif(A) : SISSIISGLNNCMFKFGLSGSLRDGKANIMQYVGMFGEIFKP                                                                               
           _____________________264__________________                                                                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.9
Translation
(A)
0.3
Closure
(%)
76.3
Bending Residues
( green )
  30 - 31
  52 - 53
  264 - 268
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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