Hypothetical Protein Yhfz

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hypothetical Protein Yhfz
  Conformer 1
(PDB)
2ozz (A)
  Conformer 2
(PDB)
2ozz (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 127 0.87   14 - 97   180 - 226
2 75 1.46   98 - 179

Sequence


           ___________________________________________________________________________________________94___________________________ 
 2ozz(A) : SNAdNKALLSHVDINNVVCApLPYTRLYEGLASGLKAQFDGIPFYYAHrGADIRVECLLNGVYDaVVSRLAAESYLSQNNLCIALELGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQ 
         :                                                                                                                          
 2ozz(B) : *************INNVVCApLPYTRLYEGLASGLKAQFDGIPFYYAHrGADIRVECLLNGVYDaVVSRLAAESYLSQNNLCIALELGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQ 
           ___________________________________________________________________________________________94___________________________ 

           ________________________________________________175____________________________________________________                  
 2ozz(A) : KItDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVaENELTlGLEATPLTDDPRFLQATEAVVLTRVDDYPqQLLRAVVDKHALLAHQQRVVSGEQEPSY                  
         :                                                                                                                          
 2ozz(B) : KItDVFFGd--VERVDLSYHESLQRIVKGDVDAVIWNV--nELTlGLEATPLTDDPRFLQATEAVVLTRVDDYPqQLLRAVVDKHALLAHQQRVVSGEQEPSY                  
           ________________________________________________175____________________________________________________                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
29.2
Translation
(A)
1.7
Closure
(%)
36.0
Bending Residues
( green )
  94 - 98
  175 - 182
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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