L-Serine Dehydratase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name L-Serine Dehydratase
  Conformer 1
(PDB)
1pwe (E)
  Conformer 2
(PDB)
1pwh (D)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 282 2.33   10 - 198   224 - 316
2 25 5.79   199 - 223

Sequence


           ________________________________________________________________________________________________________________________ 
 1pwe(E) : *****SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLA 
         :                                                                                                                          
 1pwh(D) : MAAQESLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLA 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________194_________________________222__________________ 
 1pwe(E) : KALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHP 
         :                                                                                                                          
 1pwh(D) : KALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHP 
           _______________________________________________________________________194_________________________222__________________ 

           _______________________________________________________________________________________                                  
 1pwe(E) : IFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL*******                                  
         :                                                                                                                          
 1pwh(D) : IFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQLGLNELLK                                  
           _______________________________________________________________________________________                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
159.0
Translation
(A)
-9.6
Closure
(%)
56.4
Bending Residues
( green )
  194 - 199
  222 - 231
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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