Allophanate Hydrolase Subunit 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Allophanate Hydrolase Subunit 1
  Conformer 1
(PDB)
3mml (D)
  Conformer 2
(PDB)
3mml (H)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 126 0.24   79 - 207
2 76 0.25   3 - 78

Sequence


           ________________________________________________________________________74______________________________________________ 
 3mml(D) : STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGtPAQVIAAHTGTPW 
         :                                                                                                                          
 3mml(H) : STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGtPAQVIAAHTGTPW 
           ________________________________________________________________________74______________________________________________ 

           ______________________________________________________________________________________                                   
 3mml(D) : RVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVfDVNRDKPALLTPGwVQFRAV                                   
         :                                                                                                                          
 3mml(H) : RVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVfDVNRDKPALLTPGwVQFRAV                                   
           ______________________________________________________________________________________                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.5
Translation
(A)
0.0
Closure
(%)
79.7
Bending Residues
( green )
  74 - 79
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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