Aspartokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartokinase
  Conformer 1
(PDB)
2dt9 (B)
  Conformer 2
(PDB)
2zho (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 73 0.71   7 - 15   17 - 17   93 - 155
2 69 0.9   16 - 16   18 - 92

Sequence


           _________15_________________________________________________________________________90__________________________________ 
 2dt9(B) : KAVTGVALDLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQEALEALEPVLAEIGGEAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGA 
         :                                                                                                                          
 2zho(B) : KAVTGVALDLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGV-------qQMAFTVKKDFAQEALEALEPVLAEIGGEAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGA 
           _________15_________________________________________________________________________90__________________________________ 

           __________________________________                                                                                       
 2dt9(B) : NIEMIATSEVRISVIIPAEYAEAALRAVHQAFE*                                                                                       
         :                                                                                                                          
 2zho(B) : NIEMIATSEVRISVIIPAEYAEAALRAVHQAFEL                                                                                       
           __________________________________                                                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.1
Translation
(A)
-1.0
Closure
(%)
30.9
Bending Residues
( green )
  15 - 18
  90 - 96
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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