Cell Division Protein Kinase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cell Division Protein Kinase 2
  Conformer 1
(PDB)
1fq1 (B)
  Conformer 2
(PDB)
1jsu (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 248 2.35   34 - 34   36 - 64   72 - 75   80 - 294
2 31 3.75   15 - 33   35 - 35   65 - 71   76 - 79

Sequence


           _______________________________33_____________________________64_____71__75__79_________________________________________ 
 1fq1(B) : MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 
         :                                                                                                                          
 1jsu(A) : ************GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 
           _______________________________33_____________________________64_____71__75__79_________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1fq1(B) : HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYhEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 
         :                                                                                                                          
 1jsu(A) : HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYhEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________                                                                
 1fq1(B) : KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL**                                                                
         :                                                                                                                          
 1jsu(A) : KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL                                                                
           _________________________________________________________                                                                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
35.7
Translation
(A)
0.9
Closure
(%)
81.6
Bending Residues
( green )
  33 - 36
  64 - 65
  71 - 72
  75 - 76
  79 - 80
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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