Protein Calg3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein Calg3
  Conformer 1
(PDB) 		3oti (A)
  Conformer 2
(PDB) 		3d0q (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 231 1.68   1 - 135   139 - 172   187 - 212   275 - 275   278 - 278   286 - 294   302 - 304   312 - 315   326 - 329   353 - 372
2 132 1.25   136 - 138   173 - 184   213 - 274   276 - 277   279 - 285   295 - 301   305 - 311   316 - 325   330 - 352

Sequence


           ________________________________________________________________________________________________________________________ 
 3oti(A) : RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQ 
         :                                                                                                                          
 3d0q(B) : **HrVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGT-aLVDDYRPDLVVYEQ 
           ________________________________________________________________________________________________________________________ 

           ________________135__________________________________172____179_______________________205_______________________________ 
 3oti(A) : GATVGLLAADRAGVPAVQRNQSAWRTRGMHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAA 
         :                                                                                                                          
 3d0q(B) : GATVGLLAADRAGVPAVQRNQSAWRTRG-hRSIASFLTDL-dKHQVSLPEPVATIESFPPSLLLEAEPEGWF-rWVPYGGGAVLGDRLPPVPARPEVAIT-gTIELQAFGIGAVEPIIAA 
           ________________135__________________________________172____179_______________________205_______________________________ 

           ___________________________________274________285______294____301_______311_315_______325_329____________________352____ 
 3oti(A) : AGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVREE 
         :                                                                                                                          
 3d0q(B) : AGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTAVVHHGGGGTV-tAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVREE 
           ___________________________________274________285______294____301_______311_315_______325_329____________________352____ 

           ___________________                                                                                                      
 3oti(A) : MVALPTPAETVRRIVERIS                                                                                                      
         :                                                                                                                          
 3d0q(B) : -vALPTPAETVRRIVERI*                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.6
Translation
(A) 		0.7
Closure
(%) 		76.0
Bending Residues
( green ) 		  135 - 136
  138 - 139
  172 - 173
  179 - 187
  205 - 213
  274 - 279
  285 - 286
  294 - 295
  301 - 302
  304 - 305
  311 - 312
  315 - 316
  325 - 326
  329 - 330
  352 - 353
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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