Coenzyme F420-Dependent Nadp Oxidoreductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Coenzyme F420-Dependent Nadp Oxidoreductase
  Conformer 1
(PDB) 		6to4 (D)
  Conformer 2
(PDB) 		6toe (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 154 0.84   8 - 171
2 118 0.42   172 - 289

Sequence


           ________________________________________________________________________________________________________________________ 
 6to4(D) : ******TVIGAGRMGSALIKAF-qSGYtT-VWN-RkAKSEPl---GAHLA-tVRDAVKRS-iIVVNVLDYDTSDQLLRQ-eVTRELRGKLLVQLTSGSPALAREQETWARQHGIDYLDGA 
         :                                                                                                                          
 6toe(A) : HMKPTLTVIGAGRMGSALIKAFLQSGYTTTVWEYEKARSEPLAKLGAHLADTVRDAVKRSDIIVVNVIDYDVSDQLLRQDEVTRELRGKLLVQLTSGSPALAREQETWARQHGIDYLDGA 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________171____________________________________________________________________ 
 6to4(D) : IMATPDFIGQAECALLYSGSAALFEKHRAVLN-lGGATSHVGEDVGHASALDSALLFQMWGTLFGTLQALAISRAEGIPLEKTTAFIKLTEPVTQGAVADVLTRVQQNRLTADAQTLASL 
         :                                                                                                                          
 6toe(A) : IMATPDFIGQAECALLYSGSAALFEKHRAVLNVLGGATSHVGEDVGHASALDSALLFQMWGTLFGTLQALAISRAEGIPLEKTTAFIKLTEPVTQGAVADVLTRVQQNRLTADAQTLASL 
           _________________________________________________171____________________________________________________________________ 

           ____________________________________________________                                                                     
 6to4(D) : EAHNVAFQHLLALCEERNIHRGVADAMYSVIREAVKAGHGKDDFAILTRFLK                                                                     
         :                                                                                                                          
 6toe(A) : EAHNVAFQHLLALCEERNIHRGVADAMYSVIREAVKAGHGKDDFAILTRFLK                                                                     
           ____________________________________________________                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.2
Translation
(A) 		0.1
Closure
(%) 		70.0
Bending Residues
( green ) 		  171 - 172
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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