Ig Epsilon Chain C Region

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ig Epsilon Chain C Region
  Conformer 1
(PDB) 		1o0v (B)
  Conformer 2
(PDB) 		1f6a (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 114 1.04   344 - 352   437 - 541
2 93 0.82   335 - 343   353 - 436

Sequence


           __________________________________________________________________________________________________________________343___ 
 1o0v(B) : DFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPF 
         :                                                                                                                          
 1f6a(B) : ****************************************************************************************************PC-DSNPRGVSAYLSRPSPF 
           __________________________________________________________________________________________________________________343___ 

           ___352_________________________________________________________________________________436______________________________ 
 1o0v(B) : DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
         :                                                                                                                          
 1f6a(B) : DLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
           ___352_________________________________________________________________________________436______________________________ 

           ________________________________________________________________________________                                         
 1o0v(B) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNPG                                         
         :                                                                                                                          
 1f6a(B) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVN**                                         
           ________________________________________________________________________________                                         

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.7
Translation
(A) 		0.2
Closure
(%) 		65.6
Bending Residues
( green ) 		  343 - 344
  352 - 353
  436 - 437
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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