Leucine-Rich Repeat-Containing G-Protein Coupled Receptor 5

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Leucine-Rich Repeat-Containing G-Protein Coupled Receptor 5
  Conformer 1
(PDB) 		4bsu (A)
  Conformer 2
(PDB) 		4li1 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 256 1.38   35 - 272   275 - 296
2 159 1.07   273 - 274   297 - 453

Sequence


           ________________________________________________________________________________________________________________________ 
 4bsu(A) : LRGCPTHCHCEPDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHI 
         :                                                                                                                          
 4li1(A) : **PCPAPCACDLDGG----ADCSGKGLVTVPDGLSVFTHSLDLSMNNITKLPEGAFKGFPYLEELRLAGNDLSIIHPMALSGLKELKVLTLQNNQLKTVPSESLKGLVSLQSLRLDANHI 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________________________________________2 
 4bsu(A) : SYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIR 
         :                                                                                                                          
 4li1(A) : VTVPEDSFEGLVQLRHLWLDDNSLTEVPIRPLSNLPSLQALTLALNKISHIPDYAFSNLSSLVVLHLHNNKIRTLGPHCFHGLDNLEALDLNYNNLIDFPDSIRSLPNLKELGFHSNSIT 
           _______________________________________________________________________________________________________________________2 

           72_____________________296______________________________________________________________________________________________ 
 4bsu(A) : SIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYEIK 
         :                                                                                                                          
 4li1(A) : IIPDGAFVKNPLLRTIHLYDNPLSFVGNSAFQNLSDLHFLIIRGASNVQWFPNLTGTNNLESLTLTGTKIRSIPIKFCQEQKMLRTLDLSYNEISALVGFEGCSSLEEVYLQNNQIQEVQ 
           66_____________________290______________________________________________________________________________________________ 

           __________________________________________________________________________________________________________________       
 4bsu(A) : VDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHLKLTGNHALQSLISSENFPELKVIEMPYAYQCCAFGVCfLLDFEEDLKALHSVQCSP       
         :                                                                                                                          
 4li1(A) : NETFQGLAALRMLDLSRNRIHTIHKEAFVTLKALTNLDLSFNDLTAFPTAGLHGLNQLKLTGNPNFKETL********************************************       
           __________________________________________________________________________________________________________________       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		21.7
Translation
(A) 		-0.5
Closure
(%) 		98.5
Bending Residues
( green ) 		  272 - 275
  296 - 298
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download