Mutm

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Mutm
  Conformer 1
(PDB) 		1r2y (A)
  Conformer 2
(PDB) 		1r2z (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 238 0.16   9 - 216   238 - 267
2 21 0.21   217 - 237

Sequence


           ________________________________________________________________________________________________________________________ 
 1r2y(A) : PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYA 
         :                                                                                                                          
 1r2z(A) : PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYA 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________212______________________237____ 
 1r2y(A) : KEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYV 
         :                                                                                                                          
 1r2z(A) : KEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYV 
           ________________________________________________________________________________________212______________________237____ 

           _________________________________                                                                                        
 1r2y(A) : YGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR                                                                                        
         :                                                                                                                          
 1r2z(A) : YGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR                                                                                        
           _________________________________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.3
Translation
(A) 		-0.1
Closure
(%) 		70.0
Bending Residues
( green ) 		  212 - 217
  237 - 238
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download