N-Carbamoyl-L-Amino Acid Hydrolase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name N-Carbamoyl-L-Amino Acid Hydrolase
  Conformer 1
(PDB) 		3n5f (A)
  Conformer 2
(PDB) 		3n5f (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 279 0.52   6 - 205   328 - 406
2 122 0.5   206 - 327

Sequence


           ________________________________________________________________________________________________________________________ 
 3n5f(A) : QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFT 
         :                                                                                                                          
 3n5f(B) : QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFT 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________205_____________________________________ 
 3n5f(A) : DEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAA 
         :                                                                                                                          
 3n5f(B) : DEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAA 
           ________________________________________________________________________________205_____________________________________ 

           __________________________________________________________________________________327___________________________________ 
 3n5f(A) : QIIIVIEEEARRTGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPVLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLA 
         :                                                                                                                          
 3n5f(B) : QIIIVIEEEARRTGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPVLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLA 
           __________________________________________________________________________________327___________________________________ 

           ______________________________________________                                                                           
 3n5f(A) : PICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQG                                                                           
         :                                                                                                                          
 3n5f(B) : PICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQG                                                                           
           ______________________________________________                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.3
Translation
(A) 		-0.7
Closure
(%) 		99.9
Bending Residues
( green ) 		  205 - 211
  327 - 328
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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