Oxyr

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Oxyr
  Conformer 1
(PDB) 		4x6g (A)
  Conformer 2
(PDB) 		4x6g (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 201 0.51   86 - 295
2 84 1.34   2 - 85

Sequence


           ________________________________________________________________________________78______________________________________ 
 4x6g(A) : ***HMTLTELRYIVTLAQEQHFGRAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPVGEGIVAQAQKVLEQAQGIRELAQAGKNQLAAPLKVGAIYTIGPYLFPHLIPQLHRV 
         :                                                                                                                          
 4x6g(B) : HHHHMTLTELRYIVTLAQEQHFGRAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPVGEGIVAQAQKVLEQAQGIRELAQAGKNQLAAPLKVGAIYTIGPYLFPHLIPQLHRV 
           ________________________________________________________________________________78______________________________________ 

           ________________________________________________________________________________________________________________________ 
 4x6g(A) : APQMPLYIEENFTHILRDKLRTGELDAIIIALPFQEADVLTKPLFDEPFYVLMPADHPWTAKASIDSELLNDKSLLLLGEGHDFRDQVLEACPTVRKGDENKHTTVESSSLETIRHMVAS 
         :                                                                                                                          
 4x6g(B) : APQMPLYIEENFTHILRDKLRTGELDAIIIALPFQEADVLTKPLFDEPFYVLMPADHPWTAKASIDSELLNDKSLLLLGEGHDFRDQVLEACP---------hTTVESSSLETIRHMVAS 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________                                                        
 4x6g(A) : GLGVSVLPFSAVDSHHYAPGVIEVRPFSAPVPFRTVAIAWRASFPRPRAIEVLADSIRLCS****                                                        
         :                                                                                                                          
 4x6g(B) : GLGVSVLPFSAVDSHHYAPGVIEVRPFSAPVPFRTVAIAWRASFPRPRAIEVLADSIRLCSVARP                                                        
           _________________________________________________________________                                                        

Morph
Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		128.7
Translation
(A) 		-2.6
Closure
(%) 		88.1
Bending Residues
( green ) 		  78 - 87
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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