Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Galactose 4-Epimerase
  Conformer 1
(PDB) 		1xel (A)
  Conformer 2
(PDB) 		1ek5 (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 262 1.48   5 - 190   208 - 215   233 - 268   279 - 281   302 - 330
2 52 0.81   203 - 207   216 - 232   269 - 278   282 - 301

Sequence


           ________________________________________________________________________________________________________________________ 
 1xel(A) : **MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRS--VLPV----IERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR 
         :                                                                                                                          
 1ek5(A) : MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________________________190______________207_____215_____________231_ 
 1xel(A) : AANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 
         :                                                                                                                          
 1ek5(A) : AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 
           ___________________________________________________________________________198______________215_____223_____________239_ 

           _________________________________268_______278____________________301_____________________________________               
 1xel(A) : YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD               
         :                                                                                                                          
 1ek5(A) : YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT               
           _________________________________276_______286____________________309_____________________________________               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.8
Translation
(A) 		-0.2
Closure
(%) 		89.3
Bending Residues
( green ) 		  190 - 203
  207 - 208
  215 - 216
  231 - 233
  268 - 269
  278 - 279
  281 - 284
  301 - 302
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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