Udp-Glucose 6-Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Glucose 6-Dehydrogenase
  Conformer 1
(PDB) 		2q3e (A)
  Conformer 2
(PDB) 		3khu (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 244 0.39   161 - 165   220 - 464
2 212 0.56   3 - 160   166 - 219

Sequence


           ________________________________________________________________________________________________________________________ 
 2q3e(A) : *MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQN 
         :                                                                                                                          
 3khu(A) : SMFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQN 
           ________________________________________________________________________________________________________________________ 

           ______________________________________160________________________________________________________219____________________ 
 2q3e(A) : SNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISA 
         :                                                                                                                          
 3khu(A) : SNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISA 
           ______________________________________160________________________________________________________219____________________ 

           ________________________________________________________________________________________________________________________ 
 2q3e(A) : LCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMD 
         :                                                                                                                          
 3khu(A) : LCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMD 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________________________                  
 2q3e(A) : EGAHLHIYDPKVPREQIVVDLSH--dQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV                  
         :                                                                                                                          
 3khu(A) : EGAHLHIYDPKVPREQIVVDLSHPdDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV                  
           _______________________________________________________________________________________________________                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.0
Translation
(A) 		0.4
Closure
(%) 		96.5
Bending Residues
( green ) 		  160 - 167
  219 - 222
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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