Yhfp

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Yhfp
  Conformer 1
(PDB) 		1tt7 (A)
  Conformer 2
(PDB) 		1o89 (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 156 1.14   69 - 69   89 - 91   131 - 286
2 147 1.46   18 - 68   70 - 88   92 - 130   287 - 327

Sequence


           _________________________________________________________________68__________________88_91______________________________ 
 1tt7(A) : STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLS 
         :                                                                                                                          
 1o89(A) : ******LQALLLEQQtLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLD 
           _________________________________________________________________64__________________84_87______________________________ 

           ______130_______________________________________________________________________________________________________________ 
 1tt7(A) : LKEA-vYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSl-NKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGG 
         :                                                                                                                          
 1o89(A) : ARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAES--RPLEKQVWAGAIDTVGDKVLAKVLAQMNYGG 
           ______126_______________________________________________________________________________________________________________ 

           __________________________________________286____________________________________________                                
 1tt7(A) : SVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCP-dVRAAVWER-sSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL                                
         :                                                                                                                          
 1o89(A) : CVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADL-PESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKV                                
           __________________________________________280____________________________________________                                

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.8
Translation
(A) 		-1.1
Closure
(%) 		89.5
Bending Residues
( green ) 		  68 - 70
  88 - 89
  91 - 92
  130 - 131
  286 - 291
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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