C-Jun N-Terminal Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name C-Jun N-Terminal Kinase
  Conformer 1
(PDB)
1jnk (A)
  Conformer 2
(PDB)
1uki (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 205 0.89   89 - 89   119 - 123   148 - 207   228 - 371
2 117 1.98   50 - 88   90 - 118   124 - 147   208 - 227   372 - 398

Sequence


           __________________________________________88___________________________118__123_____________________147_________________ 
 1jnk(A) : DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 
         :                                                                                                                          
 1uki(A) : **NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE 
           __________________________________________50____________________________80___85_____________________109_________________ 

           ________________________________________207_____________________________________________________________________________ 
 1jnk(A) : RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAsFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 
         :                                                                                                                          
 1uki(A) : RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--------tRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 
           ________________________________________169_____________________________________________________________________________ 

           _______________________________________________________________________________371_________________________              
 1jnk(A) : LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPqLDEREHTIEEWKELIYKEVMN*              
         :                                                                                                                          
 1uki(A) : LQPTVRTYVENRPKYAGYSFEKLFPDVLFP-----nKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKI----hTIEEWKELIYKEVMDL              
           _______________________________________________________________________________333_________________________              

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.0
Translation
(A)
-0.1
Closure
(%)
49.0
Bending Residues
( green )
  88 - 90
  118 - 119
  123 - 124
  147 - 148
  207 - 228
  371 - 385
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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