Creatine Kinase, M Chain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Creatine Kinase, M Chain
  Conformer 1
(PDB)
1vrp (B)
  Conformer 2
(PDB)
2crk (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 190 1.35   11 - 106   134 - 161   170 - 176   193 - 218   226 - 237   256 - 260   273 - 288
2 167 1.72   107 - 133   162 - 169   177 - 192   219 - 225   238 - 255   261 - 272   289 - 376

Sequence


           ________________________________________________________________________________________________106_____________________ 
 1vrp(B) : NKWKLNYSAAEEFPDLSKHNNHMAKALTLDIYKKLRDKETPSGFTLDDIIQTGVDNPGHPFIMTVGCVAGDEECYEVFKDLFDPVIEDRHGGYKPTDKHKTDLNQENLKGGDDLDPNYVL 
         :                                                                                                                          
 2crk(A) : NKYKLNYKSEEEYPDLSKHNNHMAKVLTPDLYKKLRDKETPSGFTLDDVIQTGVDNPGHPFIMTVGCVAGDEESYTVFKDLFDPIIQDRHGGFKPTDKHKTDLNHENLKGGDDLDPHYVL 
           ________________________________________________________________________________________________106_____________________ 

           ___133_________________________161_____169____176_____________192_______________________218____225_________237__________ 
 1vrp(B) : SSRVRTGRSIKGIALPPHCSRGERRLVEKLCIDGLATLTGEFQGKYYPLSSMSDAEQQQLIDDHFLFDKPISPLLLASGMARDWPDGRGIWHNNDKTFLVWVNEEDHLRVISMQKGGNMK 
         :                                                                                                                          
 2crk(A) : SSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMTEQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISMEKGGNMK 
           ___133_________________________161_____169____176_____________192_______________________218____225_________237__________ 

           _____255__260_________272_____________288_______________________________________________________________________________ 
 1vrp(B) : EVFRRFCVGLKKIEDIFVKAGRGFMWNEHLGYVLTCPSNLGTGLRGGVHVKIPHLCKHEKFSEVLKRTRLQKRGTGGVDTAAVGSIYDISNADRLGFSEVEQVQMVVDGVKLMVEMEKRL 
         :                                                                                                                          
 2crk(A) : EVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRGT---------sVFDISNADRLGSSEVEQVQLVVDGVKLMVEMEKKL 
           _____255__260_________272_____________288_______________________________________________________________________________ 

           ______________                                                                                                           
 1vrp(B) : ENGKSIDDLMPAQK                                                                                                           
         :                                                                                                                          
 2crk(A) : EKGQSIDDMIPAQK                                                                                                           
           ______________                                                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.7
Translation
(A)
-0.2
Closure
(%)
99.8
Bending Residues
( green )
  106 - 107
  133 - 134
  161 - 162
  169 - 170
  176 - 190
  192 - 193
  218 - 219
  225 - 226
  237 - 238
  255 - 256
  260 - 261
  272 - 273
  288 - 289
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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