Elongation Factor Tu (Ef-Tu)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Elongation Factor Tu (Ef-Tu)
  Conformer 1
(PDB)
2wrq (Z)
  Conformer 2
(PDB)
2c77 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 190 1.2   214 - 403
2 179 1.1   11 - 213

Sequence


           ________________________________________________________________________________________________________________________ 
 2wrq(Z) : ******TKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNV------------------------hVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHIL 
         :                                                                                                                          
 2c77(A) : KGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHIL 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________210_______________________________ 
 2wrq(Z) : LARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGR 
         :                                                                                                                          
 2c77(A) : LARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGR 
           ______________________________________________________________________________________210_______________________________ 

           ________________________________________________________________________________________________________________________ 
 2wrq(Z) : IERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEM 
         :                                                                                                                          
 2c77(A) : IERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEM 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________                                                                             
 2wrq(Z) : VMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                             
         :                                                                                                                          
 2c77(A) : VMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                             
           ____________________________________________                                                                             

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
28.8
Translation
(A)
1.7
Closure
(%)
81.4
Bending Residues
( green )
  210 - 214
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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