Adhesion Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adhesion Kinase
  Conformer 1
(PDB)
1k04 (A)
  Conformer 2
(PDB)
1k05 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 104 1.03   944 - 1047
2 26 0.78   918 - 943

Sequence


           _______________________________941______________________________________________________________________________________ 
 1k04(A) : EISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHAL 
         :                                                                                                                          
 1k05(A) : ********NLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHAL 
           _______________________________941______________________________________________________________________________________ 

           _______________________                                                                                                  
 1k04(A) : AVDAKNLLDVIDQARLKMLGQT*                                                                                                  
         :                                                                                                                          
 1k05(A) : AVDAKNLLDVIDQARLKMLGQTR                                                                                                  
           _______________________                                                                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
179.3
Translation
(A)
-1.1
Closure
(%)
94.6
Bending Residues
( green )
  941 - 945
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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