Glutamate 5-Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glutamate 5-Kinase
  Conformer 1
(PDB)
2j5t (B)
  Conformer 2
(PDB)
2j5v (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 213 0.36   5 - 103   107 - 154   158 - 263   271 - 272
2 106 0.3   104 - 106   155 - 157   264 - 270   273 - 365

Sequence


           __________________________________________________________________________________________________103___________________ 
 2j5t(B) : DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLR 
         :                                                                                                                          
 2j5v(A) : DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLR 
           __________________________________________________________________________________________________103___________________ 

           _____________________________154________________________________________________________________________________________ 
 2j5t(B) : ALLDNNVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAImSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTL 
         :                                                                                                                          
 2j5v(A) : ALLDNNVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQ------------------------------mSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTL 
           _____________________________154________________________________________________________________________________________ 

           ______263____270_________________________________________________________________________________________________        
 2j5t(B) : FHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR        
         :                                                                                                                          
 2j5v(A) : FHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR        
           ______263____270_________________________________________________________________________________________________        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.1
Translation
(A)
0.0
Closure
(%)
88.3
Bending Residues
( green )
  103 - 104
  106 - 107
  154 - 155
  157 - 158
  263 - 264
  270 - 273
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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