Glycosyl Transferase Homolog

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glycosyl Transferase Homolog
  Conformer 1
(PDB) 		4rie (A)
  Conformer 2
(PDB) 		4rif (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 314 1.63   3 - 215   243 - 246   265 - 374
2 26 2.07   216 - 242   247 - 254

Sequence


           ________________________________________________________________________________________________________________________ 
 4rie(A) : MKILFVASGSPATVFALAPLATAARNAGHDVFMGAVEDMVPYIASAGIPALSIAPSSIRRYATMDREGNPVRMPETPEEELDFAGHWFGRMAAGSMDALREVTANWRPDLVVGGSMSFAA 
         :                                                                                                                          
 4rif(A) : MKILFVASGSPATVFALAPLATAARNAGHDVFMGAVEDMVPYIASAGIPALSIAPSSIRRYATMDREG---------eEELDFAGHWFGRMAAGSMDALREVTANWRPDLVVGGSMSFAA 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________________________________________215________________________2 
 4rie(A) : ALIAAELGVPYVRQAWDTGDAWRTDPAASDELRPELRALGLDRLPDPALFVDICPPSLRPATAPPAQMMRWVPANGQRRLEPWMYTKGNRPRILVTSG---------gFLRGLVADMAAL 
         :                                                                                                                          
 4rif(A) : ALIAAELGVPYVRQAWDTGDAWRTDPAASDELRPELRALGLDRLPDPALFVDICPPSLRPATAPPAQMMRWVPANGQRRLEPWMYTKGNRPRILVTSGSRLVFAKKTGFLRGLVADMAAL 
           ____________________________________________________________________________________________215________________________2 

           42_246_____254__________________________________________________________________________________________________________ 
 4rie(A) : DAEVVIATLDEVAEE-------vRAGWVPLDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVPQGGNFVEAGLRISDFGAAITVDE----aVEKACGELIGNPSYAERARELSAEIAALP 
         :                                                                                                                          
 4rif(A) : DAEVVIATLDEVAEELRTELPGVRAGWVPLDVVVPTCDVVVHHAGGVTALTAMNAGVPQLIVPQGGNFVEAGLRISDFGAAITVDENTPEAVEKACGELIGNPSYAERARELSAEIAALP 
           42_246_____254__________________________________________________________________________________________________________ 

           ___________________                                                                                                      
 4rie(A) : LPAEVVGALEGLVENLYF*                                                                                                      
         :                                                                                                                          
 4rif(A) : LPAEVVGALEGLVENLYFQ                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		13.7
Translation
(A) 		1.1
Closure
(%) 		84.4
Bending Residues
( green ) 		  215 - 216
  242 - 243
  246 - 247
  254 - 265
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download