Lysine Acetyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Lysine Acetyltransferase
  Conformer 1
(PDB) 		4ava (A)
  Conformer 2
(PDB) 		4avb (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 151 0.82   143 - 165   203 - 330
2 132 2.77   11 - 142
3 32 4.99   166 - 202

Sequence


           ________________________________________________________________________________________________________________________ 
 4ava(A) : DGIAELTGARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATM 
         :                                                                                                                          
 4avb(A) : *******GARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATM 
           ________________________________________________________________________________________________________________________ 

           __________________142________________161______________________________________202_______________________________________ 
 4ava(A) : VHIPGVGERLLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMs-----PALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAEIAFTVA 
         :                                                                                                                          
 4avb(A) : VHIPGVGERLLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAEIAFTVA 
           __________________142________________161______________________________________202_______________________________________ 

           ____________________________________________________________________________________________                             
 4ava(A) : DAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQVIEAVG                             
         :                                                                                                                          
 4avb(A) : DAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQVIEAV*                             
           ____________________________________________________________________________________________                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		85.0
Translation
(A) 		0.7
Closure
(%) 		17.0
Bending Residues
( green ) 		  142 - 144
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		75.3
Translation
(A) 		-3.0
Closure
(%) 		52.4
Bending Residues
( green ) 		  161 - 169
  202 - 204
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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