Putative Iron Compound-Binding Protein Of Abc Transporter Family

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Iron Compound-Binding Protein Of Abc Transporter Family
  Conformer 1
(PDB) 		3be5 (A)
  Conformer 2
(PDB) 		3be6 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 166 0.24   74 - 83   149 - 289   291 - 310
2 119 0.4   21 - 73   84 - 148   290 - 290

Sequence


           _______________________________________________67______________83_______________________________________________________ 
 3be5(A) : EPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK 
         :                                                                                                                          
 3be6(A) : EPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK 
           _______________________________________________67______________83_______________________________________________________ 

           _______148______________________________________________________________________________________________________________ 
 3be5(A) : GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVhSYHSLGRVLRDAGFRFPPLIESIPEGGRdVSAERLPELDADFVFATWRGDTGGKPQDELATe 
         :                                                                                                                          
 3be6(A) : GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVhSYHSLGRVLRDAGFRFPPLIESIPEGGRdVSAERLPELDADFVFATWRGDTGGKPQDELATe 
           _______148______________________________________________________________________________________________________________ 

           ________________________289______________________                                                                        
 3be5(A) : KVpGWCQFLTACRSGRYVLISREEAISNSFASLGLaAQIQSQIAGRPLP                                                                        
         :                                                                                                                          
 3be6(A) : KVpGWCQFLTACRSGRYVLISREEAISNSFASLGLaAQIQSQIAGRPLP                                                                        
           ________________________289______________________                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.1
Translation
(A) 		-0.2
Closure
(%) 		74.6
Bending Residues
( green ) 		  67 - 74
  83 - 84
  148 - 149
  289 - 292
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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