Heat Shock-Like Protein 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heat Shock-Like Protein 1
  Conformer 1
(PDB) 		1xml (A)
  Conformer 2
(PDB) 		1xmm (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 183 0.58   144 - 334
2 93 0.79   42 - 143

Sequence


           _____________________________________________________________________________________________140________________________ 
 1xml(A) : APVRLPFSGFRLQKVLRESARDKIIFLHGKVNEeDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLP 
         :                                                                                                                          
 1xmm(B) : **VRLPFSGFRLQKVLRESARDKIIFLHGKVN--dAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLP 
           _____________________________________________________________________________________________140________________________ 

           ________________________________________________________________________________________________________________________ 
 1xml(A) : HLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDMKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALG 
         :                                                                                                                          
 1xmm(B) : HLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALG 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________                                                                     
 1xml(A) : F--------rAHLLAEVIENLECDPRHYQQRTMTFALRADDPLLKLLQEAQQ                                                                     
         :                                                                                                                          
 1xmm(B) : FEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQ                                                                     
           ____________________________________________________                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		43.0
Translation
(A) 		0.6
Closure
(%) 		86.1
Bending Residues
( green ) 		  140 - 148
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download